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How do you  or can you save an intensity file from one sequence and use it in a new sequence ? Also   if I change the name of a sequence in the sequence editor it does not save the intensity file ,in that sequence what am I doing wrong?

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1 hour ago, Dennis Laff said:

How do you  or can you save an intensity file from one sequence and use it in a new sequence ? 

Sharing intensity files among sequences is not supported.

For each S4 sequence, you can have:

1) an SE sequence file (.LMS or .LAS)

2) a PE sequence file (.LPE)

3) a PE intensity data file (.LMS.PE.LID or .LAS.PE.LID)

4) a SuperStar intensity data file  (.LMS.SS.LID or .LAS.SS.LID)

All of these files will have the same base name (e.g. "Wizards 2019"). If you change the name of the SE sequence file, then you need to manually change the others.

Matt

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